RNAapt3D

Detail of monad1030

Aptamer Detail

monad ID: monad1030

Length: 36

Target Molecule: Human matrix metalloprotease 9 (hMMP-9) (P14780)

Sequence: UGCCCUGCCCUCACCCGUUAGCCUGAGCGCCCCGCA

Adaptation Disease

Product Name: None

Phase: N/A

Remark: None

Structure monad1030-1

Parameter: CentroidFold: CONTRAFold 2^1

Structure String: ......((.((((..........)))).))......

Flip Position: *****-**-----**********--***********

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model

Secondary Structure

Structure monad1030-2

Parameter: CentroidFold: CONTRAFold 2^5

Structure String: (((...((.((((..(....)..)))).))...)))

Flip Position: -----**-------*--***--------*-------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model

Secondary Structure

Structure monad1030-3

Parameter: CentroidFold: McCaskill BL 2^2

Structure String: .((...((.((((..........)))).))...)).

Flip Position: ---------------*****----------------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model

Secondary Structure