RNAapt3D

Detail of monad1008

Aptamer Detail

monad ID: monad1008

Length: 33

Target Molecule: Moloney Murine Leukemia Virus (M-MLV) RT (Q83371)

Sequence: UUACCACGCGCUCUUAACUGCUAGCGCCAUGGC

Adaptation Disease

Product Name: None

Phase: N/A

Remark: None

Structure monad1008-1

Parameter: CentroidFold: CONTRAFold 2^3

Structure String: ...(((.(((((..........)))))..))).

Flip Position: ***--------*-****-**------------*

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1008-2

Parameter: CentroidFold: CONTRAFold 2^5

Structure String: ...(((.(((((..(....)..)))))..))).

Flip Position: **----------********-------------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1008-3

Parameter: CentroidFold: McCaskill BL 2^-2

Structure String: ....(..(((((..........)))))...)..

Flip Position: *-----------**********----------*

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1008-4

Parameter: CentroidFold: McCaskill BL 2^4

Structure String: ...(((.((((((......)..)))))..))).

Flip Position: *-----------*-***-**-------------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure