RNAapt3D

Detail of monad0072

Aptamer Detail

monad ID: monad0072

Length: 31

Target Molecule: NF-kappaB (P19838)

Sequence: GAUCCUGAAACUGUUUUAAGGUUGGCCGAUC

Adaptation Disease

Product Name: None

Phase: N/A

Remark: None

Structure monad0072-1

Parameter: CentroidFold: McCaskill(BL) 2^2

Structure String: ((((....((((.......))))....))))

Flip Position: --------------****-----*-------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad0072-2

Parameter: CentroidFold: McCaskill(BL) 2^3

Structure String: ((((((..((((.......))))))..))))

Flip Position: -------------*****-------------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad0072-3

Parameter: CentroidFold: McCaskill(BL) 2^9

Structure String: ((((((..((((.(....)))))))..))))

Flip Position: --------------****-------------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad0072-4

Parameter: CentroidFold: McCaskill(Turmer) 2^7

Structure String: ((((((..((((.(...).))))))..))))

Flip Position: --------------***--------------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure