Detail of monad0058
Aptamer Detail
- monad ID
- monad0058
- Length
- 33
- Target Molecule
-
HTLV-1 Rex peptide
- Sequence
- GGGCGCCGGUACGCAAGUACGACGGUACGCUCC
- Adaptation Disease
- Product Name
- None
- Phase
- N/A
- Remark
- None
Structure monad0058-1
- Parameter
- CentroidFold: McCaskill(BL) 2^2
- Structure String
- ((((((((((((....))))..)))..))))).
- Flip Position
- -----------******---------*-----*
- Tertiary Structure
-
Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model
- Secondary Structure
-
Structure monad0058-2
- Parameter
- CentroidFold: McCaskill(BL) 2^-1
- Structure String
- .(((.(((((((....))))..)))...)))..
- Flip Position
- *-----------****-----**---**---**
- Tertiary Structure
-
Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model
- Secondary Structure
-
Structure monad0058-3
- Parameter
- CentroidFold: McCaskill(BL) 2^-2
- Structure String
- ..((.(((((((....))))..)))...))...
- Flip Position
- *-----------****-----*---------**
- Tertiary Structure
-
Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model
- Secondary Structure
-
Structure monad0058-4
- Parameter
- CentroidFold: McCaskill(BL) 2^-4
- Structure String
- ...(.((.((((....))))...))...)....
- Flip Position
- ------------****-----*----------*
- Tertiary Structure
-
Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model
- Secondary Structure
-
Structure monad0058-5
- Parameter
- CentroidFold: McCaskill(BL) 2^-5
- Structure String
- ......(...((....)).....).........
- Flip Position
- ******------****------*--********
- Tertiary Structure
-
Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model
- Secondary Structure
-
Structure monad0058-6
- Parameter
- CentroidFold: McCaskill(Turner) 2^-1
- Structure String
- ((((.(((((((....))))..)))...)))).
- Flip Position
- ------------****-----*----*-----*
- Tertiary Structure
-
Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model
- Secondary Structure
-
Structure monad0058-7
- Parameter
- CentroidFold: McCaskill(Turner) 2^-5
- Structure String
- ..((.((.((((....))))...))...))...
- Flip Position
- ------------****-----*----*---***
- Tertiary Structure
-
Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model
- Secondary Structure
-
Structure monad0058-8
- Parameter
- CentroidFold: CONTRAfold 2^-3
- Structure String
- .....(((.(((....)))...)))........
- Flip Position
- ****---------***-----*----*******
- Tertiary Structure
-
Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model
- Secondary Structure
-
