RNAapt3D

Detail of monad1033

Aptamer Detail

monad ID: monad1033

Length: 32

Target Molecule: L-Isoleucine

Sequence: GGUCUUACGUCGUUCGCGACUAUUGGGAGACC

Adaptation Disease

Product Name: None

Phase: N/A

Remark: None

Structure monad1033-1

Parameter: CentroidFold: CONTRAFold 2^1

Structure String: ((((((..((((....))))......))))))

Flip Position: ----------*-****-*--****--------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1033-2

Parameter: CentroidFold: CONTRAFold 2^3

Structure String: ((((((.(((((....))))....).))))))

Flip Position: -------**---****--******--------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1033-3

Parameter: CentroidFold: McCaskill BL 2^2

Structure String: ........((((....))))....((....))

Flip Position: ********----****----****--****--

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1033-4

Parameter: CentroidFold: McCaskill Turner 2^-5

Structure String: (((((....((......))........)))))

Flip Position: ---******---****---*******-**---

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure