RNAapt3D

Detail of monad1026

Aptamer Detail

monad ID: monad1026

Length: 40

Target Molecule: Human Osteopontin (P10451)

Sequence: CGGCCACAGAAUGAAAAACCUCAUCGAUGUUGCAUAGUUG

Adaptation Disease

Product Name: None

Phase: N/A

Remark: None

Structure monad1026-1

Parameter: CentroidFold: CONTRAFold 2^3

Structure String: ..((.(((..((((......))))...))).)).......

Flip Position: ****************************************

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1026-2

Parameter: CentroidFold: CONTRAFold 2^5

Structure String: ..((.((((.((((......)))))..))).)).......

Flip Position: ********------******-----***************

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1026-3

Parameter: CentroidFold: McCaskill BL 2^2

Structure String: ..((.(((..((....)......)...))).)).......

Flip Position: *-------*******************-------******

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1026-4

Parameter: CentroidFold: McCaskill BL 2^5

Structure String: ((((.((((.((((......)))))..))).)).....))

Flip Position: -**-------------***------**-----********

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure