RNAapt3D

Detail of monad1024

Aptamer Detail

monad ID: monad1024

Length: 38

Target Molecule: Human complement C5 component (C5a) (P01031)

Sequence: CGAUGCGGUCUCAUGCGUCGAGUGUGAGUUUACCUUCG

Adaptation Disease

Product Name: None

Phase: N/A

Remark: None

Structure monad1024-1

Parameter: CentroidFold: CONTRAFold 2^1

Structure String: (((......(((((((.....))))))).......)))

Flip Position: **************************************

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1024-2

Parameter: CentroidFold: CONTRAFold 2^5

Structure String: (((...((((((((((.....)))))))...))).)))

Flip Position: ***-*-----------*****-------****-----*

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1024-3

Parameter: CentroidFold: McCaskill BL 2^7

Structure String: (((.(.((((((((((.....)))))))...)))))))

Flip Position: -----------------***------------------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure