RNAapt3D

Detail of monad1007

Aptamer Detail

monad ID: monad1007

Length: 30

Target Molecule: L-Isoleucine

Sequence: GGUCUUACGUCGUUCGACUAUUGGGAGACC

Adaptation Disease

Product Name: None

Phase: N/A

Remark: None

Structure monad1007-1

Parameter: CentroidFold: CONTRAFold 2^2

Structure String: ((((((..(((....)))......))))))

Flip Position: ----------******--*****----***

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1007-2

Parameter: CentroidFold: CONTRAFold 2^5

Structure String: ((((((.((((....)))....).))))))

Flip Position: -------*---*****-----***------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1007-3

Parameter: CentroidFold: McCaskill BL 2^2

Structure String: .(((...........)))....((....))

Flip Position: *-----********----------***---

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1007-4

Parameter: CentroidFold: McCaskill BL 2^4

Structure String: ((((....(.....)))))...((....))

Flip Position: ----**********----------****--

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure