RNAapt3D

Detail of monad1003

Aptamer Detail

monad ID: monad1003

Length: 26

Target Molecule: Ricin A-chain (RTA) (P02879)

Sequence: GGCGAACAGGGGACGAGCAAGACGCC

Adaptation Disease

Product Name: None

Phase: N/A

Remark: None

Structure monad1003-1

Parameter: CentroidFold: CONTRAFold 2^4

Structure String: ((((....(........)....))))

Flip Position: ----*-**----***----*------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1003-2

Parameter: CentroidFold: CONTRAFold 2^5

Structure String: ((((..(.(........)..).))))

Flip Position: -----------*****----------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1003-3

Parameter: CentroidFold: McCaskill BL 2^2

Structure String: ((((....(....)........))))

Flip Position: ----------***-*******-----

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad1003-4

Parameter: CentroidFold: McCaskill BL 2^5

Structure String: ((((..(.(....)..).....))))

Flip Position: ---------***--*-----------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure