RNAapt3D

Detail of monad0062

Aptamer Detail

monad ID: monad0062

Length: 41

Target Molecule: GTP

Sequence: GGGACGAAGUGGUUGGGCGCUUCGGCGUGUGAAAACGUCCC

Adaptation Disease

Product Name: None

Phase: N/A

Remark: None

Structure monad0062-1

Parameter: CentroidFold: McCaskill(Turner) 2^2

Structure String: ((((((...(..(((.((((....)))).)))..)))))))

Flip Position: ------***-----------****-----------------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad0062-2

Parameter: CentroidFold: CONTRAfold 2^2

Structure String: (((((((((((......))))))...((......)))))))

Flip Position: ------------*****------------*****-------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad0062-3

Parameter: CentroidFold: McCaskill(Turner) 2^1

Structure String: ((((((......(((.((((....)))).)))...))))))

Flip Position: ------***-*---------****--------**-------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad0062-4

Parameter: CentroidFold: McCaskill(Turner) 2^-1

Structure String: (((((.......(((.((((....)))).)))....)))))

Flip Position: -----*******--------****--------***------

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure

Structure monad0062-5

Parameter: CentroidFold: CONTRAfold 2^1

Structure String: (((((((((((......)))))).............)))))

Flip Position: **----------*****-----------*******----**

Tertiary Structure: Rascal: Model
Na+
Optimized Model
Modified Model
Mg2+
Optimized Model

Secondary Structure